Trait‐divergence assembly rules have been demonstrated: Limiting similarity lives! A reply to Grime

The recent Forum contribution by Grime (2006) contrasts the MacArthur/Diamond assembly‐rule approach to studying plant communities with the study of environmental trait gradients. Both are valid and useful. In doing so, Grime declares that the assembly rules model, in which negative interactions between plants act with limiting similarity to cause local trait divergence, is “not supported by empirical study of plant communities”. This is, he says, the agony of community ecology. I show that there is now abundant evidence for assembly rules, and no agony.     

Assessing water scarcity by simultaneously considering environmental flow requirements,water quantity,and water quality

Water scarcity is a widespread problem in many parts of the world. Most previous methods of water scarcity assessment only considered water quantity, and ignored water quality. In addition, the environmental flow requirement (EFR) was commonly not explicitly considered in the assessment. In this study, we developed an approach to assess water scarcity by considering both water quantity and quality, while at the same time explicitly considering EFR. We applied this quantity–quality-EFR (QQE) approach for the Huangqihai River Basin in Inner Mongolia, China. We found that to keep the river ecosystem health at a “good” level (i.e., suitable for swimming, fishing, and aquaculture), 26% of the total blue water resources should be allocated to meet the EFR. When such a “good” level is maintained, the quantity- and quality-based water scarcity indicators were 1.3 and 14.2, respectively; both were above the threshold of 1.0. The QQE water scarcity indicator thus can be expressed as 1.3(26%)|14.2, indicating that the basin was suffering from scarcity problems related to both water quantity and water quality for a given rate of EFR. The current water consumption has resulted in degradation of the basin's river ecosystems, and the EFR cannot be met in 3 months of a year. To reverse this situation, future policies should aim to reduce water use and pollution discharge, meet the EFR for maintaining healthy river ecosystems, and substantially improve pollution treatment.     

Changes in plant species richness and productivity in response to decreased nitrogen inputs in grassland in southern England

Biomass production and plant species diversity in grassland in southern England was monitored before and after a change from conventional to organic farming. Our 18-year study, part of the UK's Environmental Change Network long-term monitoring programme, showed that the cessation of artificial fertiliser use on grassland after conversion to organic farming resulted in a decrease in biomass production and an increase in plant species richness. Grassland productivity decreased immediately after fertiliser application ceased, and after two years the annual total biomass production had fallen by over 50%. In the subsequent decade, total annual grassland productivity did not change significantly, and yields reached 31–66% of the levels recorded pre-management change. Plant species richness that had remained stable during the first 5 years of our study under conventional farming, increased by 300% over the following 13 years under organic farm management. We suggest that the change in productivity is due to the altered composition of species within the plots. In the first few years after the change in farming practice, high yielding, nitrogen-loving plants were outcompeted by lower yielding grasses and forbs, and these species remained in the plots in the following years. This study shows that grassland can be converted from an environment lacking in plant species diversity to a relatively species-rich pasture within 10–15 years, simply by stopping or suspending nitrogen additions. We demonstrate that the trade-off for increasing species richness is a decrease in productivity. Grassland in the UK is often not only managed from a conservation perspective, but to also produce a profitable yield. By considering the species composition and encouraging specific beneficial species such as legumes, it may be possible to improve biomass productivity and reduce the trade-off.     

Multi-species response to rapid environmental change in a large estuary system: A biochronological approach

The sensitivity of species to environmental change is dependent on their ecological requirements (i.e. specialist v. generalist), and hence likely to be species-specific. Identifying species level variation in environmental sensitivity informs assessments of community vulnerability and assists in developing adaptive management strategies. We investigated species-specific sensitivity in fish to understand the vulnerability of differing life histories and ecological requirements to rapid environmental alteration (i.e. drought). Biochronologies of fish growth, based on increment widths in otoliths, were analysed using a mixed modelling approach. We assessed multi-decadal responses in fish growth to environmental variation in the terminal system of Australia’s largest river, for three long-lived fish species with differing life histories and ecological requirements: a freshwater specialist and two estuarine generalists. Biochronologies were between 20 and 38 years long, spanned a decade of severe drought and showed considerable inter-annual variation in growth. Precipitation influenced the growth of the obligate freshwater specialist, Macquaria ambigua ambigua. Temperature and salinity influenced the growth of the two estuarine generalists: Argyrosomus japonicus (estuarine opportunist) and Acanthopagrus butcheri (estuarine dependent), respectively. These results suggest that generalisations about how species respond to environmental change may mask species-specific responses to dependent on the constraints of their ecological requirements (i.e. specialist v. generalist). These findings also highlight the importance of considering the diversity of life history strategies that inhabit an ecosystem when developing conservation and management strategies.     

Bird sensitivity to disturbance as an indicator of forest patch conditions: An issue in environmental assessments

An Environmental Assessment (EA) is one of the steps within the Environmental Impact Assessment process. Birds are often used in EA to help decision makers evaluate potential human impacts from proposed development activities. A “sensitivity to human disturbance” index, created by Parker III et al. (1996) for all Neotropical species, is commonly considered an ecological indicator. However, this parameter was created subjectively and, for most species, there have been no rigorous field test to validate its effectiveness as such. Therefore, in this study, we aim to: (1) evaluate if, at the local scale, birds from forest patches in a human-modified landscape (HML) may differ in sensitivity from Parker's sensitivity classification; (2) evaluate the effectiveness of the species richness value at each sensitivity level as an ecological indicator; (3) gather information on how often and in which manner Parker's classification has been used in EA. To do so, bird sampling was performed in eight forest patches in a HML over one year. Then, we created a local sensitivity to disturbance using information about threat, endemism, spatial distribution and relative abundance of all species in the study area. We found that 37% of the forest birds showed different local sensitivity levels when compared with Parker's classification. Our results show that only the richness of high-sensitivity species from our local classification fitted the ecological indicator assumptions helping the environmental conditions evaluation of the studied patches. We conclude that species richness of each Parker's bird sensitivity levels do not necessarily perform as an ecological indicator at the local scale, and particularly in HML. Nevertheless, Parker's Neotropical bird sensitivity classification was used in 50% of EA we reviewed. In these, 76% assumed that it was an accurate ecological indicator of the local forest conditions for birds. The lack of clear criteria used in Parker's classification allows diverse interpretations by ornithologists, and there is no agreement about the ecological meaning of each sensitivity level and what environmental conditions each level may indicate of. Therefore, the use of Parker's classification in EA may jeopardize accurate interpretations of proposed anthropogenic impacts. Furthermore, because a bird species’ sensitivity often varies between locations, we argue that Parker's generalized classification of bird sensitivity should not be used as an indicator of forest environmental conditions in EA throughout HMLs in Neotropics. Rather, local bird ecological indices should be explored, otherwise, erroneous predictions of the anthropogenic impacts will continue to be common.     

Spiders in mofette fields—Survival of the toughest in natural carbon dioxide springs?

In mofette fields, natural carbon dioxide springs, organisms have to stand extreme CO₂ concentrations up to 100%. These hostile conditions are spatially small-scaled and further influenced by earth tides, wind and temperature. The present project investigated the influence of increased atmospheric CO₂ concentration on spiders as representatives of above-ground organisms by means of pitfall traps in three mofette fields, differing in habitat conditions in the Plesná valley, eastern Cheb Basin, Czech Republic.Among the 71 recorded spider species four were rarely found in the Czech Republic. A canonical correspondence analysis revealed significant influences of environmental parameters on the spider assemblages. Two groups of spiders are clearly distinguishable, one being positively influenced by humidity and the second by temperature. A cluster analysis showed distinct and congruent results: spider assemblages of pitfall traps at spots with a mean CO₂ concentration above 7.6% grouped close together and this grouping was independent of site. At >7.6% CO₂ significantly fewer individuals and species were found in comparison to areas with lower CO₂ concentration. Between 2.5 and 10% CO₂, spiders indicated increased CO₂ concentrations much more sensitively than endogeic organisms (Nematoda, Collembola) in a nearby mofette field. Unlike in nematodes, collembolans and plants, no mofettovageous or mofettophilous spiders were detected. In contrast to humidity, CO₂ concentration and temperature, the vegetation cover was not among the factors, which significantly influenced spiders. This is explained by the fact that mofettophilous plants occurred at spots where almost no spiders could live. In a field experiment, most Pardosa pullata males tested passed a 30 cm long corridor with increased carbon dioxide concentration. These results and that of pitfall traps showed that relatively large and wandering specimens respectively were able to transit moderately hostile spots. Further experiments are necessary to find out if there is any active avoidance of high-CO₂ areas by spiders.     

Testing environmental Kuznets curve hypothesis: The role of renewable and non-renewable energy consumption and trade in OECD countries

This paper investigates the causal relationships between per capita CO₂ emissions, gross domestic product (GDP), renewable and non-renewable energy consumption, and international trade for a panel of 25 OECD countries over the period 1980–2010. Short-run Granger causality tests show the existence of bidirectional causality between: renewable energy consumption and imports, renewable and non-renewable energy consumption, non-renewable energy and trade (exports or imports); and unidirectional causality running from: exports to renewable energy, trade to CO₂ emissions, output to renewable energy. There are also long-run bidirectional causalities between all our considered variables. Our long-run fully modified ordinary least squares (FMOLS) and dynamic ordinary least squares (DOLS) estimates show that the inverted U-shaped environmental Kuznets curve (EKC) hypothesis is verified for this sample of OECD countries. They also show that increasing non-renewable energy increases CO₂ emissions. Interestingly, increasing trade or renewable energy reduces CO₂ emissions. According to these results, more trade and more use of renewable energy are efficient strategies to combat global warming in these countries.     

Operation of a Benchtop Bioreactor

Fermentation systems are used to provide an optimal growth environment for many different types of cell cultures. The ability afforded by fermentors to carefully control temperature, pH, and dissolved oxygen concentrations in particular makes them essential to efficient large scale growth and expression of fermentation products. This video will briefly describe the advantages of the fermentor over the shake flask. It will also identify key components of a typical benchtop fermentation system and give basic instruction on setup of the vessel and calibration of its probes. The viewer will be familiarized with the sterilization process and shown how to inoculate the growth medium in the vessel with culture. Basic concepts of operation, sampling, and harvesting will also be demonstrated. Simple data analysis and system cleanup will also be discussed.